Transcription Factor
| Accessions: | TOE1 (ArabidopsisPBM 20140210) |
| Names: | RAP2.7 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | ArabidopsisPBM 20140210 1 1 Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). [Pubmed] |
| Notes: | AP2/EREBP (AP2) |
| Length: | 464 |
| Pfam Domains: | 152-201 AP2 domain 244-294 AP2 domain |
| Sequence: (in bold interface residues) | 1 MLDLNLNADSPESTQYGGDSYLDRQTSDNSAGNRVEESGTSTSSVINADGDEDSCSTRAF 60 61 TLSFDILKVGSSSGGDESPAASASVTKEFFPVSGDCGHLRDVEGSSSSRNWIDLSFDRIG 120 121 DGETKLVTPVPTPAPVPAQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLG 180 181 GFDTAHAAARAYDRAAIKFRGVDADINFTLGDYEEDMKQVQNLSKEEFVHILRRQSTGFS 240 241 RGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAINTNGREAVTN 300 301 FEMSSYQNEINSESNNSEIDLNLGISLSTGNAPKQNGRLFHFPSNTYETQRGVSLRIDNE 360 361 YMGKPVNTPLPYGSSDHRLYWNGACPSYNNPAEGRATEKRSEAEGMMSNWGWQRPGQTSA 420 421 VRPQPPGPQPPPLFSVAAASSGFSHFRPQPPNDNATRGYFYPHP |
| Interface Residues: | 158, 160, 161, 162, 163, 167, 169, 171, 176, 178, 250, 252, 253, 258, 260, 264, 267, 269, 271 |
| 3D-footprint Homologues: | 5wx9_A, 7wq5_A, 1gcc_A, 7et4_D |
| Binding Motifs: | TOE1 WCCTCGTACc TOE1_2 rAACcTrsGA TOE1_3 wAACCTTAAm |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.