DNA Binding Site
| Accessions: | NAC_2 (EEADannot 2023-12-22), MA1627.2.20 (JASPAR 2024) |
| Organisms: | Arabidopsis thaliana, Mus musculus |
| Libraries: | EEADannot 2023-12-22 1, JASPAR 2024 2 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 10 |
| Sequence: | TCTCCTCCAC |
| Type: | Heterodimer |
| Binding TFs: | P22561 (Zinc finger, C2H2 type, Wilm's tumour protein, Zinc-finger double domain, C2H2-type zinc finger) NAC (No apical meristem (NAM) protein) P22561 |
| Binding Motifs: | EEAD0003 TCTCCksCAGs MA1627.2 cCTCCCCCAC |
| Publications: | Dubos C, Kelemen Z, Sebastian A, Bulow L, Huep G, Xu W, Grain D, Salsac F, Brousse C, Lepiniec L, Weisshaar B, Contreras-Moreira B, Hehl R (2014) Integrating bioinformatic resources to predict transcription factors interacting with cis-sequences conserved in co-regulated genes.BMC Genomics 15:317. doi: 10.1186/1471-2164-15-317 [Pubmed] Hamilton TB, Barilla KC, Romaniuk PJ. High affinity binding sites for the Wilms' tumour suppressor protein WT1. Nucleic Acids Res 23:277-84 (1995). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.