DNA Binding Site

Accessions: MA1001.1.5 (JASPAR 2018), MA1247.1.1 (JASPAR 2018), MA1264.1.8 (JASPAR 2018)
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2018 1
1 Khan A, Fornes O, Stigliani A, Gheorghe M, Castro-Mondragon JA, van der Lee R, Bessy A, Cheneby , Kulkarni SR, Tan G, Baranasic D, Arenillas DJ, Sandelin A, Vandepoele K, Lenhard B, Ballester B, Wasserman WW, Parcy F, Mathelier A (2017) JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework. Nucleic Acids Res. doi: 10.1093/nar/gkx1126 [Pubmed]
Length: 23
Sequence: aaagTGGCGGCGGCGGAGGtgga
Type: Heterodimer
Binding TFs: Q9C5I3 (AP2 domain)
Q9FZ90 (AP2 domain)
A0A178VAV2 (AP2 domain)
Binding Motifs: MA1001.1 scGCCGymaw
MA1247.1 ygrCGGCGGmGrhgg
MA1264.1 ygryGGCGGCGGmGg
Publications: Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). [Pubmed]


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