DNA Binding Site

						

			
Accessions: AGGTTA (AthaMYB 1.0), MA1996.2.5 (JASPAR 2024), UN0735.1.15 (JASPAR 2024), UN0735.1.8 (JASPAR 2024)

			
Organisms: Arabidopsis thaliana, Caenorhabditis elegans
Libraries: AthaMYB 1.0 1, JASPAR 2024 2
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 6
Sequence: AGGTTA
Type: Heterodimer
Binding TFs: AtMYB1 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB10 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB108 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB112 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB118 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB122 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB18 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB20 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB23 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB27 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB36 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB40 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB41 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB42 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB43 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB44 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB47 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB48 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB49 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB5 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB50 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB52 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB55 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB62 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB66 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB67 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB69 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB70 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB74 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB77 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB78 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB79 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB8 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB81 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB82 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB83 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB86 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB89 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB9 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB91 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB95 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
Q10902
Binding Motifs: AtMYB108_II / AtMYB62_II GTwrGTTr
AtMYB10_II RGTdGKTr
AtMYB112_II rbTaGTTr
AtMYB118_II GTwrGTTA
AtMYB122_II GCwkGTTr
AtMYB18_II AGwrGTTA
AtMYB1_II AGGTTA
AtMYB20_II RbWdGTTr
AtMYB23_II GYWdGTTr
AtMYB27_II / AtMYB48_II rkTrGTTr
AtMYB36_II / AtMYB55_II / AtMYB69_II GywdGTTr
AtMYB40_II / AtMYB43_II / AtMYB47_II / AtMYB79_II / AtMYB91_II rbTrGTTr
AtMYB41_II rbTrGTTA
AtMYB42_II rGTdGKTr
AtMYB44_II GdtAGTTr
AtMYB49_II RkTrGTTr
AtMYB50_II / AtMYB86_II GkTwGkTr
AtMYB52_II RSWdGTTR
AtMYB5_II RbWdGTTR
AtMYB66_II rkTrGTTA
AtMYB67_II / AtMYB82_II rkTrGTTR
AtMYB70_II GwhrGTTr
AtMYB74_II rswkGTTr
AtMYB77_II rdtAGTTA
AtMYB78_II / AtMYB81_II / AtMYB83_II GywdGTTr
AtMYB89_II GbTkGTTr
AtMYB8_II rbTrGTTr
AtMYB95_II RkTdGTTr
AtMYB9_II rsTwGkTr
MA1996.2 AGGTCA
UN0735.1 AGGTCA
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]


Penvose A, Keenan JL, Bray D, Ramlall V, Siggers T. Comprehensive study of nuclear receptor DNA binding provides a revised framework for understanding receptor specificity. Nat Commun 10:2514 (2019). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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