DNA Binding Site

Accessions: MA1001.1.15 (JASPAR 2024), MA1005.1.13 (JASPAR 2024), MA1221.1.14 (JASPAR 2024), MA1225.1.20 (JASPAR 2024), MA1245.1.14 (JASPAR 2024), MA1247.1.10 (JASPAR 2024), MA1264.1.12 (JASPAR 2024)
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 23
Sequence: accgCCGCCGCCGCCGCCAccgt
Type: Heterodimer
Binding TFs: O80341 (AP2 domain)
Q7G1L2 (AP2 domain)
O80339 (AP2 domain)
Q9C5I3 (AP2 domain)
P93007 (AP2 domain)
Q9FZ90 (AP2 domain)
A0A178VAV2 (AP2 domain)
A0A178VAV2
O80339
O80341
P93007
Q7G1L2
Q9C5I3
Q9FZ90
Binding Motifs: MA1001.1 scGCCGymaw
MA1005.1 CGCCGcCr
MA1221.1 tkrCGGCGGmGghgg
MA1225.1 ccrcCgCCGCCGCCr
MA1245.1 ccdcCkCCGCCGymr
MA1247.1 ygrCGGCGGmGrhgg
MA1264.1 ygryGGCGGCGGmGg
Publications: Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.