DNA Binding Site

Accessions: aldY (DBTBS 1.0)
Names: aldY
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Length: 41
Sequence: attcGTTTACatattggcttcagCGGAAAtagaagaagaca
Binding TFs: SigB (alpha/beta hydrolase fold, Alpha/beta hydrolase family, Alpha/beta hydrolase family)
Binding Motifs: SigB_1 GtTTaA
SigB_2 GGGwAw
Publications: Petersohn A, Bernhardt J, Gerth U, Höper D, Koburger T, Völker U, Hecker M. Identification of sigma(B)-dependent genes in Bacillus subtilis using a promoter consensus-directed search and oligonucleotide hybridization. Journal of bacteriology 181:5718-24 (1999). [Pubmed]

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