DNA Binding Site

						

			
Accessions: TGCGGTTG (AthaMYB 1.0), MA1286.2.3 (JASPAR 2024)

			
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1, JASPAR 2024 2
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 8
Sequence: TGCGGTTG
Type: Heterodimer
Binding TFs: AtMYB1 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB100 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB102 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB106 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB107 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB108 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB109 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB11 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB112 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB113 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB114 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB116 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB118 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB123 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB13 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB14 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB15 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB19 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB22 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB23 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB25 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB30 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB31 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB32 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB33 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB36 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB37 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB39 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB40 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB41 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB42 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB44 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB46 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB47 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB48 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB5 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB52 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB53 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB54 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB55 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB56 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB59 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB60 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB61 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB62 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB65 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB66 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB68 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB69 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB7 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB70 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB72 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB73 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB74 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB75 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB77 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB78 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB81 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB84 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB85 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB86 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB87 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB88 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB9 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB90 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB91 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB94 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB96 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB99 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
Q9C758 (TCP family transcription factor)
Q9C758
Binding Motifs: AtMYB100_I / AtMYB106_I / AtMYB109_I / AtMYB116_I / AtMYB19_I / AtMYB1_I / AtMYB23_I / AtMYB25_I / AtMYB31_I / AtMYB44_I / AtMYB53_I / AtMYB62_I / AtMYB66_I / AtMYB69_I / AtMYB70_I / AtMYB73_I / AtMYB77_I / AtMYB78_I / AtMYB85_I / AtMYB88_I wamaGTTr
AtMYB102_I / AtMYB107_I / AtMYB112_I / AtMYB113_I / AtMYB114_I / AtMYB118_I / AtMYB11_I / AtMYB123_I / AtMYB13_I / AtMYB14_I / AtMYB22_I / AtMYB32_I / AtMYB33_I / AtMYB36_I / AtMYB39_I / AtMYB40_I / AtMYB41_I / AtMYB42_I / AtMYB47_I / AtMYB48_I / AtMYB52_I / AtMYB54_I / AtMYB55_I / AtMYB56_I / AtMYB59_I / AtMYB5_I / AtMYB61_I / AtMYB68_I / AtMYB74_I / AtMYB75_I / AtMYB81_I / AtMYB86_I / AtMYB90_I / AtMYB91_I / AtMYB99_I / AtMYB9_I wwmaGTTr
AtMYB108_I wvmdGTTr
AtMYB15_I / AtMYB96_I wwcaGTTr
AtMYB30_I ddmrGTTr
AtMYB37_I / AtMYB87_I wtcaGTTr
AtMYB46_I kdCdGTTr
AtMYB60_I / AtMYB72_I / AtMYB7_I / AtMYB94_I ddMdGTTr
AtMYB65_I kkCrGTTr
AtMYB84_I dbmrGTTr
MA1286.2 GGGACCAC
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]


Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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