DNA Binding Site

Accessions: 1a0a_C (3D-footprint 20231221)
Organisms: Saccharomyces cerevisiae, Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 17
Sequence: CTCACACGTGGGACTAG
Binding TFs: 1a0a_B (Helix-loop-helix DNA-binding domain)
Binding Motifs: 1a0a_AB CaCGTGG
1a0a_B cgTGG
Publications: Shimizu T, Toumoto A, Ihara K, Shimizu M, Kyogoku Y, Ogawa N, Oshima Y, Hakoshima T. Crystal structure of PHO4 bHLH domain-DNA complex: flanking base recognition. The EMBO journal 16:4689-97 (1997). [Pubmed]

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