DNA Binding Site

Accessions: AAAAAAAT (UniPROBE 20160601)
Organisms: Mus musculus, Saccharomyces cerevisiae
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: AAAAAAAT
Type: Heterodimer
Binding TFs: UP00044A (bZIP Maf transcription factor)
UP00077A (SRF-type transcription factor (DNA-binding and dimerisation domain))
UP00341A
UP00342A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Binding Motifs: UP00044A_1 wwAAwwTGCTGACtt
UP00077A_1 wwCCwwATwwGGwa
UP00341A_1 ryarwwAWwWWwWTwywawm
UP00342A_1 wywrdrAAAAwTTTTyywykg
UP00044A_2 raaAAAAkTGCAmsr
UP00077A_2 stwwaaAaAAAammtwh
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.