DNA Binding Site

Accessions: MA1334.1.6 (JASPAR 2024), MA1337.1.5 (JASPAR 2024), MA1340.1.8 (JASPAR 2024), MA1341.1.8 (JASPAR 2024), MA1347.1.7 (JASPAR 2024), MA1351.1.7 (JASPAR 2024)
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 23
Sequence: tgcaTGCCACGTCAGCACCcaat
Type: Heterodimer
Binding TFs: Q84LG2 (bZIP transcription factor, Basic region leucine zipper, G-box binding protein MFMR)
O65683 (bZIP transcription factor, Basic region leucine zipper)
Q9LFU3 (bZIP transcription factor, Basic region leucine zipper)
C0Z2L5 (bZIP transcription factor, Basic region leucine zipper)
Q9LZP8 (bZIP transcription factor, Basic region leucine zipper)
Q42510 (Sec7 domain, Guanine nucleotide exchange factor in Golgi transport N-terminal)
C0Z2L5
O65683
Q42510
Q84LG2
Q9LFU3
Q9LZP8
Binding Motifs: MA1334.1 tGCCACGTCAkCwwh
MA1337.1 dwwGmTGACGTGGCa
MA1340.1 dwwGmTGACGTGGCa
MA1341.1 dwwGmTGACGTGGCa
MA1347.1 tGCCACGTsasmwwh
MA1351.1 TGCCACGTsasmwwh
Publications: Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). [Pubmed]

Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.