DNA Binding Site

Accessions: MA0192.1.10 (JASPAR 2024), MA0094.3.13 (JASPAR 2024), MA0094.3.20 (JASPAR 2024), MA0094.3.7 (JASPAR 2024), MA2161.1.11 (JASPAR 2024)
Organisms: Drosophila melanogaster, Caenorhabditis elegans
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 7
Sequence: TTAATTG
Type: Heterodimer
Binding TFs: P83949 (Homeobox domain)
Q9VEI9 (Homeobox domain)
P83949
Q18273
Q9VEI9
Binding Motifs: MA0192.1 TTAATTG
MA0094.3 TTAATKR
MA2161.1 aTAATTr
Publications: Noyes M.B, Meng X, Wakabayashi A, Sinha S, Brodsky M.H, Wolfe S.A. A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system. Nucleic acids research 36:2547-60 (2008). [Pubmed]

Noyes M.B, Christensen R.G, Wakabayashi A, Stormo G.D, Brodsky M.H, Wolfe S.A. Analysis of homeodomain specificities allows the family-wide prediction of preferred recognition sites. Cell 133:1277-89 (2008). [Pubmed]

Doitsidou M, Flames N, Topalidou I, Abe N, Felton T, Remesal L, Popovitchenko T, Mann R, Chalfie M, Hobert O. A combinatorial regulatory signature controls terminal differentiation of the dopaminergic nervous system in C. elegans 27:1391-405 (Genes). [Pubmed]

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.