DNA Binding Site

Accessions: 3w6v_C (3D-footprint 20231221)
Organisms: Streptomyces griseus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 14
Sequence: GTTGGCGGGTTCAC
Binding TFs: 3w6v_A (Bacterial regulatory helix-turn-helix proteins, AraC family, Helix-turn-helix domain)
Binding Motifs: 3w6v_A cCGcCA
Publications: Yao M.D, Ohtsuka J, Nagata K, Miyazono K, Zhi Y, Ohnishi Y, Tanokura M. Complex structure of the DNA-binding domain of AdpA, the global transcription factor in Streptomyces griseus, and a target duplex DNA reveals the structural basis of its tolerant DNA sequence specificity. The Journal of biological chemistry 288:31019-29 (2013). [Pubmed]

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