DNA Binding Site

Accessions: 1b72_D (3D-footprint 20231221)
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 19
Sequence: CTCTATGATTGATCGGCTG
Type: Heterodimer
Binding TFs: 1b72_A (Homeobox domain)
1b72_B (Homeobox domain, Homeobox KN domain)
Binding Motifs: 1b72_A TTCa
1b72_AB ATGATTGAA
1b72_B aTCAt
Publications: Piper D.E, Batchelor A.H, Chang C.P, Cleary M.L, Wolberger C. Structure of a HoxB1-Pbx1 heterodimer bound to DNA: role of the hexapeptide and a fourth homeodomain helix in complex formation. Cell 96:587-97 (1999). [Pubmed]

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