DNA Binding Site

Accessions: 1vol_D (3D-footprint 20231221)
Organisms: Arabidopsis thaliana
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 16
Sequence: CAGCCCTTTTATAGCC
Binding TFs: 1vol_B (Transcription factor TFIID (or TATA-binding protein, TBP))
Binding Motifs: 1vol_AB / 1vol_B cTtTTATA
Publications: Nikolov D.B, Chen H, Halay E.D, Usheva A.A, Hisatake K, Lee D.K, Roeder R.G, Burley S.K. Crystal structure of a TFIIB-TBP-TATA-element ternary complex. Nature 377:119-28 (1995). [Pubmed]

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