DNA Binding Site

Accessions: 1ais_C (3D-footprint 20231221)
Organisms: Pyrococcus woesei
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 17
Sequence: AACTTACTTTTTAAAGC
Binding TFs: 1ais_A (Transcription factor TFIID (or TATA-binding protein, TBP))
Binding Motifs: 1ais_A TTTTTAAA
1ais_AB TTTTTAAA
Publications: Kosa P.F, Ghosh G, DeDecker B.S, Sigler P.B. The 2.1-A crystal structure of an archaeal preinitiation complex: TATA-box-binding protein/transcription factor (II)B core/TATA-box. Proceedings of the National Academy of Sciences of the United States of America 94:6042-7 (1997). [Pubmed]

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