DNA Binding Motif

						

			
Accessions: M0659 (AthalianaCistrome v4_May2016)

			
Names: ANAC005.DAP, T04351;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 19
Consensus: TwrCTTsttywayAAGtww
Weblogo: 
PSSM: P0      A      C      G      T
01    131     35     16    408      T
02    213     46     54    277      w
03    245    108    160     77      r
04      0    589      0      1      C
05      0      0      2    588      T
06      0      0      0    590      T
07    139    222    169     60      s
08     74     88     55    373      t
09    112     88    101    289      t
10    106    204     37    243      y
11    189    124     68    209      w
12    292     90    105    103      a
13     12    291     37    250      y
14    589      0      1      0      A
15    587      3      0      0      A
16      0      0    590      0      G
17     37     93     69    391      t
18    166     39     12    373      w
19    273     11     12    294      w
Binding TFs: T04351 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.