DNA Binding Motif

						

			
Accessions: 2i9t_B (3D-footprint 20231221)

			
Names: Nuclear factor NF-kappa-B p105 subunit
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structure of NF-kB p65-p50 heterodimer bound to PRDII element of B-interferon promoter
Length: 5
Consensus: ttCCC
Weblogo: 
PSSM: P0      A      C      G      T
01     16     13     13     54      t
02     13     13     16     54      t
03      0     96      0      0      C
04      0     96      0      0      C
05      0     96      0      0      C
Binding TFs: 2i9t_B (Rel homology domain (RHD))
Binding Sites: 2i9t_C
2i9t_D
			
Publications: Escalante C.R, Shen L, Thanos D, Aggarwal A.K. Structure of NF-kappaB p50/p65 heterodimer bound to the PRDII DNA element from the interferon-beta promoter. Structure (London, England : 1993) 10:383-91 (2002). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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