DNA Binding Motif

Accessions: ATF4_CEBPD (HumanTF2 1.0)
Names: ATF4_CEBPD
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 14
Consensus: rgaTGAyGCAAyms
Weblogo:
PSSM: P0 A C G T
01 24466 11285 39621 14304 r
02 19691 22052 63870 16028 g
03 71129 21787 21745 0 a
04 0 0 130 89771 T
05 0 0 89808 0 G
06 89976 0 0 0 A
07 0 39161 289 80424 y
08 0 116 89517 0 G
09 0 90143 249 0 C
10 89739 0 292 86 A
11 89643 173 0 0 A
12 0 48419 433 73513 y
13 31704 24336 20953 12681 m
14 20356 26118 23643 19558 s
Type: Heterodimer
Binding TFs: ATF4_TF1 / ATF4_TF2 (bZIP transcription factor, Basic region leucine zipper)
CEBPD_TF2 (bZIP transcription factor, Basic region leucine zipper)
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

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