DNA Binding Motif

						

			
Accessions: MA0395.1 (JASPAR 2024)

			
Names: STP2
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 20
Consensus: yrawygGyGCCGyrysackh
Weblogo: 
PSSM: P0      A      C      G      T
01    180    258    175    385      y
02    288    242    293    174      r
03    438    193    211    157      a
04    276    209    176    336      w
05    126    405    143    325      y
06    238    111    567     81      g
07    113     11    829     45      G
08     34    647      5    312      y
09      2      5    987      4      G
10      0    849    148      1      C
11      1    866    128      3      C
12      8     13    948     29      G
13     14    520      4    460      y
14    618     12    338     30      r
15     86    433    139    341      y
16    218    312    359    109      s
17    326    240    205    227      a
18    231    427    161    179      c
19    158    237    344    259      k
20    342    265    122    268      h
Type: Heterodimer
Binding TFs: P38704 (Zinc finger, C2H2 type, C2H2-type zinc finger)
P38704
			
Publications: Newburger D.E, Bulyk M.L. UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic acids research 37:D77-82 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.