DNA Binding Motif

Accessions: ASCL2_methyl_3 (HT-SELEX2 May2017)
Names: ASCL2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: rrCAGCTGyy
Weblogo:
PSSM: P0 A C G T
01 1066 434 775 259 r
02 802 311 1732 49 r
03 0 2534 0 22 C
04 2534 25 0 61 A
05 0 304 2534 288 G
06 320 2534 331 0 C
07 47 0 0 2534 T
08 0 0 2534 0 G
09 37 1685 309 849 y
10 305 748 443 1038 y
Binding TFs: ASCL2 (Helix-loop-helix DNA-binding domain)
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

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