DNA Binding Motif

Accessions: AtLEC2 (Athamap 20091028)
Names: AtLEC2
Organisms: Arabidopsis thaliana
Libraries: Athamap 20091028 1
1 Bulow L, Engelmann S, Schindler M, Hehl R. AthaMap, integrating transcriptional and post-transcriptional data. Nucleic acids research 37:D983-6 (2009). [Pubmed]
Length: 10
Consensus: kyCATGCAaa
Weblogo:
PSSM: P0 A C G T
01 2 0 3 4 k
02 2 4 0 3 y
03 0 9 0 0 C
04 9 0 0 0 A
05 0 0 0 9 T
06 0 0 9 0 G
07 0 9 0 0 C
08 9 0 0 0 A
09 5 1 1 1 a
10 5 1 1 1 a
Binding TFs: AtLEC2 (B3 DNA binding domain)
Publications: Braybrook SA, Stone SL, Park S, Bui AQ, Le BH, Fischer RL, Goldberg RB, Harada JJ. 2006. Genes directly regulated by LEAFY COTYLEDON2 provide insight into the control of embryo maturation and somatic embryogenesis. Proc Natl Acad Sci U S A 103: 3468-73. [Pubmed]

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