DNA Binding Motif

						

			
Accessions: M0201 (AthalianaCistrome v4_May2016)

			
Names: ABI5.DAP, T10092;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 18
Consensus: wdrwgrwsACGTGKCarw
Weblogo: 
PSSM: P0      A      C      G      T
01    241     71    131    152      w
02    217     59    167    152      d
03    224     80    158    133      r
04    161     39     98    297      w
05     44     19    400    132      g
06    157    119    296     23      r
07    198     92      0    305      w
08      0    289    294     12      s
09    595      0      0      0      A
10      0    595      0      0      C
11      0      0    595      0      G
12      0      0      0    595      T
13      0      0    595      0      G
14      0      0    446    149      K
15     27    568      0      0      C
16    394     50    123     28      a
17    151    124    174    146      r
18    190    117     87    201      w
Binding TFs: T10092 (bZIP transcription factor, Basic region leucine zipper)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.