DNA Binding Motif

						

			
Accessions: ANDR_HUMAN.H10MO.A|M01006 (HOCOMOCO 10)

			
Names: AR
Organisms: Homo sapiens
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: Steroid hormone receptors (NR3){2.1.1}; GR-like receptors (NR3C){2.1.1.1}
Length: 17
Consensus: dGyACabwcTGTtCytk
Weblogo: 
PSSM: P0      A      C      G      T
01    197     11    142    139      d
02     22      1    363    103      G
03     70    131    121    167      y
04    371     33     26     59      A
05      1    425     38     25      C
06    304     19     45    121      a
07     35    144    160    150      b
08    140     94     75    180      w
09     73    223    109     84      c
10     49     11      2    427      T
11     15     10    463      1      G
12     12     18      6    453      T
13     86     60     41    302      t
14      5    423      2     59      C
15     36    232     11    210      y
16    121    111     63    194      t
17     88     54    156    191      k
Binding TFs: ANDR_HUMAN (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains), Androgen receptor)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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