DNA Binding Motif

						

			
Accessions: ATF4_2 (HT-SELEX2 May2017)

			
Names: ATF4
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 14
Consensus: ggaTGACGTCAtcc
Weblogo: 
PSSM: P0      A      C      G      T
01   3391   1409   8433   1682      g
02   2079   1455   8271   2361      g
03   8930   2055   2184     13      a
04      6      1      8   9993      T
05      5      0  10001      0      G
06   9989      8      0      0      A
07      2  10012      0      0      C
08      0      0  10007      6      G
09      0      0      0   9995      T
10      0   9995      0      5      C
11   9991      9      0      2      A
12      0   2183   2134   9030      t
13   2287   8238   1403   2095      c
14   1835   8450   1393   3267      c
Binding TFs: ATF4 (bZIP transcription factor, Basic region leucine zipper)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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