DNA Binding Motif

						

			
Accessions: MA0942.1 (JASPAR 2024)

			
Names: ARF1
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 8
Consensus: RCCGACAw
Weblogo: 
PSSM: P0      A      C      G      T
01    722      2    276      1      R
02      3    993      1      4      C
03      4    993      2      2      C
04      4      2    992      1      G
05    989      3      1      7      A
06      2    993      2      2      C
07    901      4     88      8      A
08    262    220    207    312      w
Type: Heterodimer
Binding TFs: Q8L7G0 (AUX/IAA family, B3 DNA binding domain, Auxin response factor)
Q8L7G0
			
Publications: Ulmasov T., Hagen G., Guilfoyle T. J. ARF1, a transcription factor that binds to auxin response elements. Science 276:1865-1868 (1997). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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