DNA Binding Motif
| Accessions: | MA1325.1 (JASPAR 2024), M0293 (AthalianaCistrome v4_May2016) |
| Names: | GATA14, GATA14.DAP, T14461; |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1, AthalianaCistrome v4_May2016 2 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] 2 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 15 |
| Consensus: | tttAGATCTrwtttt |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 81 101 89 280 t 02 100 119 133 199 t 03 81 87 42 341 t 04 497 4 26 24 A 05 0 1 550 0 G 06 551 0 0 0 A 07 0 2 0 549 T 08 4 547 0 0 C 09 2 97 31 421 T 10 202 46 296 7 r 11 189 70 127 165 w 12 106 55 70 320 t 13 71 112 83 285 t 14 86 124 97 244 t 15 99 125 119 208 t |
| Type: | Heterodimer |
| Binding TFs: | Q9M1U2 / T14461 (GATA zinc finger) Q9M1U2 |
| Publications: | Jeong MJ, Shih MC. Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis. Biochem Biophys Res Commun 300:555-62 (2003). [Pubmed] O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] |
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