DNA Binding Motif

						

			
Accessions: MA0279.1 (JASPAR 2024)

			
Names: CAD1
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: COMPILED
Length: 10
Consensus: ATTArTAAkC
Weblogo: 
PSSM: P0      A      C      G      T
01   2056    100     98      0      A
02     97      0      0   2095      T
03      0      0      0   2154      T
04   1889     98      0    172      A
05    602    213   1464      0      r
06      0      0      0   2154      T
07   1947    206      0      0      A
08   2154      0      0      0      A
09      0      0   1416    798      k
10      0   2088      0     97      C
Type: Heterodimer
Binding TFs: P24813 (bZIP transcription factor, Transcription factor PAP1)
P24813
			
Publications: Pachkov M, Erb I, Molina N, van Nimwegen E. SwissRegulon: a database of genome-wide annotations of regulatory sites. Nucleic acids research 35:D127-31 (2007). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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