DNA Binding Motif

						

			
Accessions: MA0918.1 (JASPAR 2024)

			
Names: unc-62
Organisms: Caenorhabditis briggsae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 12
Consensus: gAsmTGTCAytt
Weblogo: 
PSSM: P0      A      C      G      T
01    217    217    350    217      g
02    718     94     94     94      A
03    139    383    432     46      s
04    253    601     24    122      m
05      0      0      0    999      T
06      0      0    999      0      G
07      0      0      0    999      T
08     94    906      0      0      C
09    806     34     34    127      A
10    156    255    244    344      y
11    205    205    205    386      t
12    227    227    227    320      t
Type: Heterodimer
Binding TFs: A8WL06 (Homeobox domain, Homeobox KN domain)
A8WL06
			
Publications: Van Nostrand EL, Sánchez-Blanco A, Wu B, Nguyen A, Kim SK. Roles of the developmental regulator unc-62/Homothorax in limiting longevity in Caenorhabditis elegans. PLoS Genet : (2013;9(2):e1003325.). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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