DNA Binding Motif

Accessions: 5emq_AB (3D-footprint 20231221)
Names: Glucocorticoid receptor
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Transcription factor GRDBD and GRE complex
Length: 13
Consensus: GnACAnnntGtnC
Weblogo:
PSSM: P0 A C G T
01 0 0 96 0 G
02 24 24 24 24 n
03 96 0 0 0 A
04 0 96 0 0 C
05 96 0 0 0 A
06 24 24 24 24 n
07 24 24 24 24 n
08 24 24 24 24 n
09 13 13 13 57 t
10 0 0 96 0 G
11 16 13 13 54 t
12 24 24 24 24 n
13 0 96 0 0 C
Type: Heterodimer
Binding TFs: 5emq_A (Zinc finger, C4 type (two domains))
5emq_B (Zinc finger, C4 type (two domains))
Binding Sites: 5emq_C
5emq_D

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