DNA Binding Motif

Accessions: SD0002.1 (JASPAR 2024)
Names: at_AC_acceptor
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 11
Consensus: mAGGCAAGTry
Weblogo:
PSSM: P0 A C G T
01 223 197 95 33 m
02 461 17 20 50 A
03 15 1 524 8 G
04 0 0 548 0 G
05 0 548 0 0 C
06 504 11 23 10 A
07 449 16 48 35 A
08 9 9 525 5 G
09 39 41 43 425 T
10 187 74 196 91 r
11 108 137 119 184 y
Publications: Chong A, Zhang G, Bajic V.B. Information for the Coordinates of Exons (ICE): a human splice sites database. Genomics 84:762-6 (2004). [Pubmed]

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