DNA Binding Motif

						

			
Accessions: ExuR (RegulonDB 7.5)

			
Names: ExuR, ExuR DNA-binding transcriptional repressor
Organisms: ECK12
Libraries: RegulonDB 7.5 1
1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed]
Length: 17
Consensus: AAAgTgGTwdAmCAmaT
Weblogo: 
PSSM: P0      A      C      G      T
01      6      0      0      0      A
02      5      1      0      0      A
03      5      1      0      0      A
04      1      0      4      1      g
05      0      0      0      6      T
06      1      0      4      1      g
07      0      0      6      0      G
08      0      0      0      6      T
09      3      0      0      3      w
10      2      0      2      2      d
11      5      0      1      0      A
12      4      2      0      0      m
13      1      5      0      0      C
14      6      0      0      0      A
15      4      2      0      0      m
16      4      0      1      1      a
17      0      0      0      6      T
Binding TFs: ECK120006852 (Bacterial regulatory proteins, gntR family, FCD domain)
Binding Sites: ECK120018520
ECK120048930
ECK120049006
ECK125134896
			
	
			


			

				

				
				
				
				

			

			

		

	
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