DNA Binding Motif

Accessions: MA0530.1 (JASPAR 2024)
Names: cnc::maf-S
Organisms: Drosophila melanogaster
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-chip
Length: 15
Consensus: rATGAckcdGCAmww
Weblogo:
PSSM: P0 A C G T
01 142 113 159 60 r
02 340 20 114 0 A
03 0 0 0 474 T
04 0 0 474 0 G
05 407 46 21 0 A
06 0 292 80 102 c
07 80 0 169 225 k
08 78 215 90 91 c
09 136 33 163 142 d
10 24 0 422 28 G
11 0 474 0 0 C
12 368 0 106 0 A
13 133 128 99 114 m
14 221 63 0 190 w
15 214 12 0 248 w
Type: Heterodimer
Binding TFs: Q4QPP9 (bZIP Maf transcription factor)
Q4QPP9
Binding Sites: MA0530.1.1
MA0530.1.10
MA0530.1.11
MA0530.1.12
MA0530.1.13
MA0530.1.14
MA0530.1.15
MA0530.1.16
MA0530.1.17
MA0530.1.18
MA0530.1.19
MA0530.1.2
MA0530.1.20
MA0530.1.3
MA0530.1.4
MA0530.1.5
MA0530.1.6
MA0530.1.7
MA0530.1.8
MA0530.1.9
Publications: Veraksa A, McGinnis N, Li X, Mohler J, McGinnis W. Cap 'n' collar B cooperates with a small Maf subunit to specify pharyngeal development and suppress deformed homeotic function in the Drosophila head. Development (Cambridge, England) 127:4023-37 (2000). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.