DNA Binding Motif

Accessions: bowl_SOLEXA_FBgn0004893 (FlyZincFinger 1.0 )
Names: CG10021
Organisms: Drosophila melanogaster
Libraries: FlyZincFinger 1.0 1
1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]
Length: 14
Consensus: mmammCrGTAGCmm
Weblogo:
PSSM: P0 A C G T
01 840 620 513 420 m
02 780 821 344 445 m
03 933 547 520 392 a
04 949 735 206 502 m
05 1102 1046 133 111 m
06 68 2278 0 46 C
07 1260 66 1067 0 r
08 0 0 2394 0 G
09 519 12 105 1756 T
10 2294 56 43 0 A
11 0 8 2385 0 G
12 0 2175 47 170 C
13 784 911 248 449 m
14 703 899 550 240 m
Binding TFs: bowl (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Publications: Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.