DNA Binding Motif
| Accessions: | FadR (RegulonDB 7.5) |
| Names: | FadR, FadR DNA-binding transcriptional dual regulator |
| Organisms: | ECK12 |
| Libraries: | RegulonDB 7.5 1 1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed] |
| Length: | 16 |
| Consensus: | AgCTGGTCyGAyswsT |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 10 1 3 0 A 02 3 1 7 3 g 03 1 11 2 0 C 04 3 0 0 11 T 05 0 0 14 0 G 06 3 0 10 1 G 07 0 1 0 13 T 08 3 11 0 0 C 09 2 4 3 5 y 10 0 0 13 1 G 11 12 1 0 1 A 12 1 8 0 5 y 13 1 6 4 3 s 14 7 0 0 7 w 15 1 6 6 1 s 16 1 0 1 12 T |
| Binding TFs: | ECK120004751 (Bacterial regulatory proteins, gntR family, FadR C-terminal domain) |
| Binding Sites: | ECK120011826 ECK120011890 ECK120011892 ECK120011901 ECK120012925 ECK120012927 ECK120012929 ECK120012975 ECK120013404 ECK120013411 ECK120017076 ECK120030279 ECK125110247 ECK125141192 |
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