DNA Binding Motif

						

			
Accessions: MA1053.1 (JASPAR 2024)

			
Names: ERF109
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 8
Consensus: sCGCCGCC
Weblogo: 
PSSM: P0      A      C      G      T
01     38    287    661     13      s
02     50    936      8      6      C
03      3      5    989      3      G
04      3    827    168      2      C
05     13    982      2      3      C
06      4     13    978      5      G
07     38    862     13     86      C
08    207    773      2     18      C
Type: Heterodimer
Binding TFs: Q9SZ06 (AP2 domain)
Q9SZ06
			
Publications: Matsuo M, Johnson JM, Hieno A, Tokizawa M, Nomoto M, Tada Y, Godfrey R, Obokata J, Sherameti I, Yamamoto YY, Böhmer FD, Oelmüller R. High REDOX RESPONSIVE TRANSCRIPTION FACTOR1 Levels Result in Accumulation of Reactive Oxygen Species in Arabidopsis thaliana Shoots and Roots. Mol Plant 8:1253-73 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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