DNA Binding Motif

Accessions: 1rm1_AC (3D-footprint 20210203)
Names: TATA-box binding protein
Organisms: Saccharomyces cerevisiae, Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Libraries: 3D-footprint 20210203 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structure of a Yeast TFIIA/TBP/TATA-box DNA Complex
Length: 8
Consensus: gTtTTATA
Weblogo:
PSSM: P0 A C G T
01 13 16 54 13 g
02 0 0 0 96 T
03 16 13 13 54 t
04 0 0 0 96 T
05 0 0 0 96 T
06 96 0 0 0 A
07 0 0 0 96 T
08 96 0 0 0 A
Binding TFs: 1rm1_A (Transcription factor TFIID (or TATA-binding protein, TBP))
Binding Sites: 1rm1_D
1rm1_E

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