DNA Binding Motif

Accessions: M0010 (AthalianaCistrome v4_May2016)
Names: AT1G77200.ampDAP, T01704;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 12
Consensus: wkTGTCGGTgrh
Weblogo:
PSSM: P0 A C G T
01 222 78 104 193 w
02 128 63 186 220 k
03 1 37 0 559 T
04 0 0 597 0 G
05 3 0 0 594 T
06 0 597 0 0 C
07 0 0 597 0 G
08 1 0 596 0 G
09 0 129 0 468 T
10 126 46 372 53 g
11 239 85 180 93 r
12 191 159 81 166 h
Binding TFs: T01704 (AP2 domain)
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.