DNA Binding Motif

Accessions: 1co0_AB (3D-footprint 2022-04-03)
Names: TRP OPERON REPRESSOR
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 2022-04-03 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: NMR STUDY OF TRP REPRESSOR-MTR OPERATOR DNA COMPLEX
Length: 15
Consensus: GTACCagnnnnnGAG
Weblogo:
PSSM: P0 A C G T
01 0 0 96 0 G
02 0 0 0 96 T
03 96 0 0 0 A
04 0 96 0 0 C
05 0 96 0 0 C
06 54 16 13 13 a
07 13 13 57 13 g
08 24 24 24 24 n
09 24 24 24 24 n
10 24 24 24 24 n
11 24 24 24 24 n
12 24 24 24 24 n
13 0 0 96 0 G
14 96 0 0 0 A
15 0 0 96 0 G
Binding TFs: 1co0_A / 1co0_B (Trp repressor protein)
Binding Sites: 1co0_E
1co0_F

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