DNA Binding Motif

						

			
Accessions: 1co0_AB (3D-footprint 2022-04-03)

			
Names: TRP OPERON REPRESSOR
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 2022-04-03 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: NMR STUDY OF TRP REPRESSOR-MTR OPERATOR DNA COMPLEX
Length: 15
Consensus: GTACCagnnnnnGAG
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0     96      0      G
02      0      0      0     96      T
03     96      0      0      0      A
04      0     96      0      0      C
05      0     96      0      0      C
06     54     16     13     13      a
07     13     13     57     13      g
08     24     24     24     24      n
09     24     24     24     24      n
10     24     24     24     24      n
11     24     24     24     24      n
12     24     24     24     24      n
13      0      0     96      0      G
14     96      0      0      0      A
15      0      0     96      0      G
Binding TFs: 1co0_A / 1co0_B (Trp repressor protein)
Binding Sites: 1co0_E
1co0_F
			
	
			


			

				

				
				
				
				

			

			

		

	
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