DNA Binding Motif

						

			
Accessions: MA0919.1 (JASPAR 2024)

			
Names: dsc-1
Organisms: Caenorhabditis briggsae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 10
Consensus: ryTAATTAry
Weblogo: 
PSSM: P0      A      C      G      T
01    330    199    296    174      r
02    114    405    146    334      y
03     63    138     13    787      T
04    817     53     66     63      A
05    960     12     16     12      A
06     12     16     12    960      T
07     63     66     53    817      T
08    787     13    138     63      A
09    334    146    405    114      r
10    174    296    199    330      y
Type: Heterodimer
Binding TFs: A8X4D9 (Homeobox domain)
A8X4D9
			
Publications: Noyes M.B, Christensen R.G, Wakabayashi A, Stormo G.D, Brodsky M.H, Wolfe S.A. Analysis of homeodomain specificities allows the family-wide prediction of preferred recognition sites. Cell 133:1277-89 (2008). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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