DNA Binding Motif
| Accessions: | TBR1_DBD (HumanTF 1.0), MA0802.1 (JASPAR 2024) |
| Names: | TBR1 |
| Organisms: | Mus musculus, Homo sapiens |
| Libraries: | HumanTF 1.0 1, JASPAR 2024 2 1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | Site type: monomeric; SELEX cycle: 3, HT-SELEX |
| Length: | 10 |
| Consensus: | AGGTGTGAAa |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 34509 359 3329 1433 A 02 6880 3255 34509 4480 G 03 70 254 34509 213 G 04 39 1759 88 34509 T 05 0 6 34509 4 G 06 2386 4742 157 34509 T 07 1175 2551 34509 7001 G 08 34509 90 584 205 A 09 25869 2575 1488 4576 A 10 18507 5619 4537 5846 a |
| Type: | Heterodimer |
| Binding TFs: | TBR1_DBD (T-box) Q16650 (T-box) Q16650 |
| Publications: | Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] Wilson V, Conlon FL. The T-box family. Genome Biol : (2002;3(6):REVIEWS3008.). [Pubmed] |
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