DNA Binding Motif

						

			
Accessions: 1rcs_B (3D-footprint 2022-04-03)

			
Names: TRP REPRESSOR
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 2022-04-03 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: NMR STUDY OF TRP REPRESSOR-OPERATOR DNA COMPLEX
Length: 7
Consensus: GTACtAg
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0     96      0      G
02      0      0      0     96      T
03     88      0      8      0      A
04      0     96      0      0      C
05     16      8     16     56      t
06     80      0      8      8      A
07     16     16     48     16      g
Binding TFs: 1rcs_B (Trp repressor protein)
Binding Sites: 1rcs_E / 1rcs_F
			
Publications: Zhang H, Zhao D, Revington M, Lee W, Jia X, Arrowsmith C, Jardetzky O. The solution structures of the trp repressor-operator DNA complex. Journal of molecular biology 238:592-614 (1994). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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