DNA Binding Motif
Accessions: | GlpR (RegulonDB 7.5) |
Names: | GlpR, GlpR DNA-binding transcriptional repressor |
Organisms: | ECK12 |
Libraries: | RegulonDB 7.5 1 1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed] |
Length: | 20 |
Consensus: | awATGwkcrawwwCGmrCaw |
Weblogo: | |
PSSM: | P0 A C G T 01 11 2 1 3 a 02 9 2 0 6 w 03 12 2 1 2 A 04 0 2 0 15 T 05 1 0 14 2 G 06 7 4 1 5 w 07 0 2 7 8 k 08 3 11 3 0 c 09 8 2 6 1 r 10 11 0 2 4 a 11 7 0 1 9 w 12 9 1 1 6 w 13 8 2 0 7 w 14 0 15 1 1 C 15 3 0 14 0 G 16 10 7 0 0 m 17 9 1 7 0 r 18 3 14 0 0 C 19 8 1 4 4 a 20 5 3 1 8 w |
Binding TFs: | ECK120004869 (Bacterial regulatory proteins, gntR family, DeoR C terminal sensor domain, DeoR-like helix-turn-helix domain, HTH domain) |
Binding Sites: | ECK120012732 ECK120012734 ECK120012740 ECK120012743 ECK120012746 ECK120012749 ECK120013454 ECK120013456 ECK120013458 ECK120013460 ECK120013462 ECK120013464 ECK120013968 ECK120013970 ECK120015213 ECK120015215 ECK120015217 ECK120015606 |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.