DNA Binding Motif

						

			
Accessions: M0670 (AthalianaCistrome v4_May2016)

			
Names: ANAC034.DAP, T10708;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 19
Consensus: CsTrwyywayACGkmAhyt
Weblogo: 
PSSM: P0      A      C      G      T
01      2    596      0      0      C
02      4    265    204    125      s
03     10     61     29    498      T
04    157    141    201     99      r
05    174    107     88    229      w
06    136    156     87    219      y
07    113    167    110    208      y
08    181    135     82    200      w
09    293     62    106    137      a
10     38    329     37    194      y
11    587      9      2      0      A
12     15    479    102      2      C
13      0      0    598      0      G
14     22     60    328    188      k
15    180    340      0     78      m
16    553      2     19     24      A
17    188    161     53    196      h
18    136    217     65    180      y
19    107    113    123    255      t
Binding TFs: T10708 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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