DNA Binding Motif

Accessions: MA1107.1 (JASPAR 2024)
Names: KLF9
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 13
Consensus: rscCACACCCacy
Weblogo:
PSSM: P0 A C G T
01 1766 1169 1892 927 r
02 952 1449 2847 506 s
03 1241 3886 354 273 c
04 24 5659 39 32 C
05 5393 245 72 44 A
06 24 5623 79 28 C
07 4614 118 904 118 A
08 41 5531 124 58 C
09 460 5109 97 88 C
10 55 5524 53 122 C
11 3522 1372 335 525 a
12 472 3286 984 1012 c
13 1209 2200 864 1481 y
Type: Heterodimer
Binding TFs: Q13886 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Q13886
Binding Sites: MA1107.1.1 / MA1107.1.6
MA1107.1.10
MA1107.1.11
MA1107.1.12
MA1107.1.13
MA1107.1.14
MA1107.1.15
MA1107.1.16
MA1107.1.17
MA1107.1.18
MA1107.1.19
MA1107.1.2
MA1107.1.20
MA1107.1.3
MA1107.1.4
MA1107.1.5
MA1107.1.7
MA1107.1.8
MA1107.1.9
Publications: Kaczynski J, Cook T, Urrutia R. Sp1- and Krüppel-like transcription factors. Genome Biol : (2003;4(2):206.). [Pubmed]

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