DNA Binding Motif

						

			
Accessions: JDP2_methyl_1 (HT-SELEX2 May2017)

			
Names: JDP2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: grTGAyGTCAyc
Weblogo: 
PSSM: P0      A      C      G      T
01   6983   8346  20608   6266      g
02  27264   2009  14939    173      r
03      0      0      0  42203      T
04      0      0  42203   2313      G
05  42203      0     18      0      A
06      0  23864    278  18339      y
07    137    151  42203      0      G
08    244      0      0  42203      T
09   3099  42203     37      7      C
10  42203      1      0      0      A
11    175  12995   2182  29208      y
12   7121  17534  10081   7467      c
Binding TFs: JDP2 (bZIP transcription factor, Basic region leucine zipper)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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