DNA Binding Motif

						

			
Accessions: MA1090.1 (JASPAR 2024)

			
Names: WRKY60
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 11
Consensus: vyGGTCAAmgt
Weblogo: 
PSSM: P0      A      C      G      T
01    270    278    269    183      v
02    106    409    106    380      y
03    136     22    820     22      G
04      0      0   1000      0      G
05      0      0      0   1000      T
06      0   1000      0      0      C
07   1000      0      0      0      A
08   1000      0      0      0      A
09    258    608     67     67      m
10    145    246    465    145      g
11    228    228    228    316      t
Type: Heterodimer
Binding TFs: Q9SK33 (WRKY DNA -binding domain)
Q9SK33
			
Publications:  Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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