DNA Binding Motif

Accessions: 6lty_B (3D-footprint 20231221)
Names: Putative antitoxin HigA3
Organisms: Mycobacterium tuberculosis, strain ATCC 25618 / H37Rv
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: DNA bound antitoxin HigA3
Length: 5
Consensus: cygAG
Weblogo:
PSSM: P0 A C G T
01 13 56 13 14 c
02 22 27 22 25 y
03 19 20 38 19 g
04 67 9 11 9 A
05 8 8 72 8 G
Binding TFs: 6lty_B (Helix-turn-helix, Helix-turn-helix domain, Helix-turn-helix domain)
Binding Sites: 6lty_C
6lty_D
Publications: Park JY, Kim HJ, Pathak C, Yoon HJ, Kim DH, Park SJ, Lee BJ. Induced DNA bending by unique dimerization of HigA antitoxin. IUCrJ : (2020). [Pubmed]

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