DNA Binding Motif
| Accessions: | MA0921.1 (JASPAR 2024) |
| Names: | ceh-48 |
| Organisms: | Caenorhabditis elegans |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | PBM |
| Length: | 9 |
| Consensus: | rayCrATaw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 395 143 268 194 r 02 442 138 196 224 a 03 54 358 54 534 y 04 95 789 55 62 C 05 386 36 511 66 r 06 931 1 0 68 A 07 26 0 0 974 T 08 535 135 128 203 a 09 342 214 182 261 w |
| Type: | Heterodimer |
| Binding TFs: | O45080 (Homeobox domain, CUT domain) O45080 |
| Publications: | Noyes M.B, Christensen R.G, Wakabayashi A, Stormo G.D, Brodsky M.H, Wolfe S.A. Analysis of homeodomain specificities allows the family-wide prediction of preferred recognition sites. Cell 133:1277-89 (2008). [Pubmed] Contrino S, Smith RN, Butano D, Carr A, Hu F, Lyne R, Rutherford K, Kalderimis A, Sullivan J, Carbon S, Kephart ET, Lloyd P, Stinson EO, Washington NL, Perry MD, Ruzanov P, Zha Z, Lewis SE, Stein LD, Micklem G. modMine: flexible access to modENCODE data. Nucleic Acids Res : (2012). [Pubmed] |
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