DNA Binding Motif

Accessions: ABI3 (Athamap 20091028)
Names: ABI3
Organisms: Arabidopsis thaliana
Libraries: Athamap 20091028 1
1 Bulow L, Engelmann S, Schindler M, Hehl R. AthaMap, integrating transcriptional and post-transcriptional data. Nucleic acids research 37:D983-6 (2009). [Pubmed]
Length: 9
Consensus: sksCATGCA
Weblogo:
PSSM: P0 A C G T
01 0 1 2 0 s
02 0 0 1 2 k
03 0 1 2 0 s
04 0 3 0 0 C
05 3 0 0 0 A
06 0 0 0 3 T
07 0 0 3 0 G
08 0 3 0 0 C
09 3 0 0 0 A
Binding TFs: ABI3 (B3 DNA binding domain)
Binding Sites: ABI3_1
ABI3_2
ABI3_3
Publications: Reidt W, Wohlfarth T, Ellerstrom M, Czihal A, Tewes A, Ezcurra I, Rask L, Baumlein H. 2000. Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product. Plant J. 21:401-8. [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.