DNA Binding Motif
Accessions: | DgsA (RegulonDB 7.5) |
Names: | DgsA, DgsA DNA-binding transcriptional repressor |
Organisms: | ECK12 |
Libraries: | RegulonDB 7.5 1 1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed] |
Length: | 23 |
Consensus: | TTWTTTTrvwbykCGwAAWWAwT |
Weblogo: | |
PSSM: | P0 A C G T 01 1 0 0 6 T 02 0 0 0 7 T 03 5 0 0 2 W 04 0 0 0 7 T 05 0 0 0 7 T 06 0 0 0 7 T 07 0 1 0 6 T 08 4 0 3 0 r 09 2 3 2 0 v 10 3 1 1 2 w 11 0 2 3 2 b 12 1 3 0 3 y 13 0 0 3 4 k 14 0 6 0 1 C 15 0 0 7 0 G 16 4 0 0 3 w 17 7 0 0 0 A 18 7 0 0 0 A 19 2 0 0 5 W 20 2 0 0 5 W 21 6 0 0 1 A 22 4 1 0 2 w 23 1 0 0 6 T |
Binding TFs: | ECK120007897 (ROK family) |
Binding Sites: | ECK120011242 ECK120011244 ECK120013416 ECK120014107 ECK120014113 ECK120015755 |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.